PDI - Resultado de Búsqueda

Carlos Alberto Navarro Retamal

Chile

Molecular dynamics Simulation; Protein modeling; Coarse grained molecular dynamics simulations

Licenciado en Bioinformática, UNIVERSIDAD DE TALCA. Chile, 2011
Doctorado en Ciencias Aplicadas, UNIVERSIDAD DE TALCA. Chile, 2016
Ingeniero en Bioinformática, UNIVERSIDAD DE TALCA. Chile, 2011

Postdoc Full Time

Center of Bioinformatics and Molecular Simulation. University of Talca, Chile

Talca, Chile

2017 - 2020
Research Assistant Full Time

Center of Bioinformatics and Molecular Simulation. University of Talca, Chile

Talca, Chile

2020 - 2021


Transforming Non-Selective Angiotensin-Converting Enzyme Inhibitors in C- and N-domain Selective Inhibitors by Using Computational Tools Alfaro, Sergio; Caballero, Julio Article ISI MINI-REVIEWS IN MEDICINAL CHEMISTRY (2020)
Docking, Interaction Fingerprint, and Three-Dimensional Quantitative Structure-Activity Relationship (3D-QSAR) of Sigma1 Receptor Ligands, Analogs of the Neuroprotective Agent RC-33 Collina, S Article ISI FRONTIERS IN CHEMISTRY (2019)
Nutrient exchange in arbuscular mycorrhizal symbiosis from a thermodynamic point of view Dreyer, Ingo; Spitz, Olivia; Kanonenberg, Kerstin; Montag, Karolin; Handrich, Maria R.; Ahmad, Sabahuddin; Schott-Verdugo, Stephan; Riedelsberger, Janin; Succurro, Antonella; Gould, Sven B.; et al. Article ISI SCOPUS NEW PHYTOLOGIST (2019)
Energetic differences between non-domain-swapped and domain-swapped chain connectivities in the K2P potassium channel TRAAK Article ISI SCOPUS RSC ADVANCES (2018)
Folding and Lipid Composition Determine Membrane Interaction of the Disordered Protein COR15A Bremer, A; Ingolfsson, HI; Thalhammer, A; Hincha, DK Article ISI SCOPUS BIOPHYSICAL JOURNAL (2018)
Insights into the structural requirements of 2(S)-amino-6-boronohexanoic acid derivatives as arginase i inhibitors: 3D-QSAR, docking, and interaction fingerprint studies VelÃ¡zquez-Libera J.L. Article ISI SCOPUS INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2018)
Molecular modeling of tau proline-directed protein kinase (PDPK) inhibitors Article SCOPUS Neuromethods (2018)
Mycobacterium tuberculosis serine/threonine protein kinases: structural information for the design of their specific ATP-competitive inhibitors Article ISI SCOPUS Journal of Computer-Aided Molecular Design (2018)
Direct and Auger Electron-Induced, Single- and Double-Strand Breaks on Plasmid DNA Caused by Tc-99m-Labeled Pyrene Derivatives and the Effect of Bonding Distance Reissig, Falco; Mamat, Constantin; Steinbach, Joerg; Pietzsch, Hans-Juergen; Freudenberg, Robert; Navarro-Retamal, Carlos; Kotzerke, Joerg; Wunderlich, Gerd Article ISI SCOPUS PLOS ONE (2016)
Flavonoids as CDK1 Inhibitors: Insights in Their Binding Orientations and Structure-Activity Relationship Navarro-Retamal, Carlos Article ISI SCOPUS PLOS ONE (2016)
Molecular dynamics simulations and CD spectroscopy reveal hydration-induced unfolding of the intrinsically disordered LEA proteins COR15A and COR15B from Arabidopsis thaliana Navarro-Retamal, Carlos; Bremer, Anne; Hincha, Dirk K.; Thalhammer, Anja Article ISI SCOPUS PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2016)
Structural and Affinity Determinants in the Interaction between Alcohol Acyltransferase from F. x ananassa and Several Alcohol Substrates: A Computational Study Navarro-Retamal, Carlos; Gaete-Eastman, Carlos; Zheng, Jie Article ISI SCOPUS PLOS ONE (2016)
characterization of the two-step reaction mechanism of phenol decomposition by a Fenton reaction Valdés, C; Alzate-Morales, J; Osorio, E; Villasenor, J.; Navarro-Retamal, C Article ISI SCOPUS Chemical Physics Letters (2015)


Molecular Modeling of LEA proteins in plants PCI (12-0019) Proyecto 2013-2014 Investigador(a)

Raúl Herrera

Académico

Biología Molecular y Biotecnología

Universidad de Talca

Talca, Chile

Jans Alzate

Associate Professor

Departamento de Bioinformática

UNIVERSIDAD DE TALCA

Talca, Chile

Wendy Gonzalez

Director of the Center for Bioinformatics, Simulations and Modeling (CBSM)

Bioinformática

CENTRO DE BIOINFORMÁTICA Y SIMULACIÓN MOLECULAR (CBSM)/ UNIVERSIDAD DE TALCA

Talca, Chile

Carlos Gaete

Investigador Asistente

INSTITUTO DE CIENCIAS BIOLÓGICAS - UNIVERSIDAD DE TALCA

Talca, Chile

Marco Molina

Profesor Titular

Ecología y Biodiversidad

Universidad de Talca

Talca, Chile

Julio Caballero

Full Professor

Departamento de Bioinformática

Universidad de Talca

Talca, Chile

Cristian Valdés

Investigador

CIEAM

Líneas de Investigación

Educación

Licenciado en Bioinformática, UNIVERSIDAD DE TALCA. Chile, 2011

Doctorado en Ciencias Aplicadas, UNIVERSIDAD DE TALCA. Chile, 2016

Ingeniero en Bioinformática, UNIVERSIDAD DE TALCA. Chile, 2011

Experiencia Profesional

Postdoc Full Time

Research Assistant Full Time

Article (13)

Transforming Non-Selective Angiotensin-Converting Enzyme Inhibitors in C- and N-domain Selective Inhibitors by Using Computational Tools

Docking, Interaction Fingerprint, and Three-Dimensional Quantitative Structure-Activity Relationship (3D-QSAR) of Sigma1 Receptor Ligands, Analogs of the Neuroprotective Agent RC-33

Nutrient exchange in arbuscular mycorrhizal symbiosis from a thermodynamic point of view

Energetic differences between non-domain-swapped and domain-swapped chain connectivities in the K2P potassium channel TRAAK

Folding and Lipid Composition Determine Membrane Interaction of the Disordered Protein COR15A

Insights into the structural requirements of 2(S)-amino-6-boronohexanoic acid derivatives as arginase i inhibitors: 3D-QSAR, docking, and interaction fingerprint studies

Molecular modeling of tau proline-directed protein kinase (PDPK) inhibitors

Mycobacterium tuberculosis serine/threonine protein kinases: structural information for the design of their specific ATP-competitive inhibitors

Direct and Auger Electron-Induced, Single- and Double-Strand Breaks on Plasmid DNA Caused by Tc-99m-Labeled Pyrene Derivatives and the Effect of Bonding Distance

Flavonoids as CDK1 Inhibitors: Insights in Their Binding Orientations and Structure-Activity Relationship

Molecular dynamics simulations and CD spectroscopy reveal hydration-induced unfolding of the intrinsically disordered LEA proteins COR15A and COR15B from Arabidopsis thaliana

Structural and Affinity Determinants in the Interaction between Alcohol Acyltransferase from F. x ananassa and Several Alcohol Substrates: A Computational Study

characterization of the two-step reaction mechanism of phenol decomposition by a Fenton reaction

Proyecto (1)

Molecular Modeling of LEA proteins in plants

Raúl Herrera

Jans Alzate

Wendy Gonzalez

Carlos Gaete

Marco Molina

Julio Caballero

Cristian Valdés

Carlos Navarro

Janin Riedelsberger

Ingo Dreyer

María Rubio

José Velázquez