Man

Marcelo Alejandro Rivas Astroza

Postdoctoral Researcheer

UNIVERSITY OF CALIFORNIA, SAN DIEGO

San Diego, Estados Unidos

Líneas de Investigación


Genetic and epigenetic regulation of cellular phenotype; Mathematical modelling of bioprocesses

Educación

  •  Magíster en Ciencias de la Ingeniería con Mención en Ingeniería Bioquímica, PONTIFICIA UNIVERSIDAD CATOLICA DE VALPARAISO. Chile, 2009
  •  Bioengineering, UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN. Estados Unidos, 2015
  •  Licenciatura en Ciencias de la Ingeniería con mención en Ingeniería Bioquímica, PONTIFICIA UNIVERSIDAD CATOLICA DE VALPARAISO. Chile, 2005
  •  Ingeniero Civil Bioquímico, PONTIFICIA UNIVERSIDAD CATOLICA DE VALPARAISO. Chile, 2006

Experiencia Académica

  •   Postodoctoral Researcher Full Time

    PONTIFICIA UNIVERSIDAD CATOLICA DE VALPARAISO

    Valparaíso, Chile

    2017 - 2019

  •   Postodoctoral Researcher Full Time

    University of California, San Diego

    San Diego, Estados Unidos

    2016 - 2016

  •   Assistant Professor Full Time

    Universidad Tecnológica Metropolitana

    Assistant Professor

    Santiago, Chile

    2020 - A la fecha

Experiencia Profesional

  •   Profesor de la clase: Computación Aplicada

    Pontificia Universidad Católica de Valparaíso

    Chile

    2009 - 2009

  •   Profesor de la clase: Termódinamica

    Pontificia Universidad Católica de Valparaíso

    Chile

    2009 - 2009

  •   Guest Lecturer: Applied Genomic Technologies

    University of California San Diego

    Estados Unidos

    2015 - 2015


 

Article (9)

Phenotype-specific estimation of metabolic fluxes using gene expression data

Gonzalez-Arrue, Nicolas; Inostroza, Isidora

Article ISI
ISCIENCE  (2023)

Kinetic model of Clostridium beijerinckii's Acetone-Butanol-Ethanol fermentation considering metabolically diverse cell types

Guerrero, Karlo

Article ISI
JOURNAL OF BIOTECHNOLOGY  (2021)

Metabolic flux configuration determination using information entropy

Rivas-Astroza, Marcelo

Article ISI
PLOS ONE  (2020)

SMARCAD1 Contributes to the Regulation of Naive Pluripotency by Interacting with Histone Citrullination

Xiao, Shu; Lu, Jia; Sridhar, Bharat; Yu, Pengfei; Zhao, Tianyi; Chen, Chieh-Chun; McDee, Darina; Telugu, Bhanu Prakash V. L.; Levasseur, Dana; Zhao, Jing Crystal; Tanaka, Tetsuya S.; Stormo, Gary

Article ISI
Cell Reports  (2017)

Systematic Mapping of RNA-Chromatin Interactions In Vivo

Nguyen, Tri C.; Chen, Weizhong; Yan, Zhangming; Hebert, Lucie

Article ISI
CURRENT BIOLOGY  (2017)

Transcriptomic insights into the genetic basis of mammalian limb diversity

Maier, Jennifer A.; Deng, Jenny; Dowling, Anna; Oboikovitz, Paige; Cao, Xiaoyi; Behringer, Richard R.; Cretekos, Chris J.; Rasweiler, John J.; Zhong, Sheng; Sears, Karen E.

Article ISI
BMC EVOLUTIONARY BIOLOGY  (2017)

The Relationship between Gene Network Structure and Expression Variation among Individuals and Species

Poe, Rachel; Kosog, Kari; Marcot, Jonathan D.; Rapti, Zoi

Article ISI
PLOS GENETICS  (2015)

Genomic analysis of hepatic farnesoid X receptor binding sites reveals altered binding in obesity and direct gene repression by farnesoid X receptor in mice

Lee, Jiyoung; Seok, Sunmi; Kim, Kyungsu; Smith, Zachary

Article ISI
HEPATOLOGY  (2012)

Mapping personal functional data to personal genomes

Xie, Dan

Article ISI
BIOINFORMATICS  (2011)

BookSection (1)

Metabolic diversity in cell populations: probability densities over the flux polytope



BookSection
 (2023)

ConferencePoster (7)

Phenotype-Specific Estimation of Metabolic Fluxes Using the Principle of Maximum Entropy



ConferencePoster
 (2022)

“Estimación del estado metabólico utilizando entropía de la información”.



ConferencePoster
 (2021)

“Narrowing Flux Balance Analysis Predictions Down to a Single Flux Configuration Using the Principle of Maximum Entropy



ConferencePoster
 (2021)

“Metabolic flux configuration determination using information entropy”



ConferencePoster
 (2020)

“Kinetic model of Clostridium beijerinckii based on superposition of its phenotypic states”



ConferencePoster
 (2018)

“Mining of RNA-seq libraries to compute cellular metabolic state”



ConferencePoster
 (2018)

“Genome-wide mapping of histone marks at single-nucleosome resolution"



ConferencePoster
 (2015)

Proyecto (4)

Modelo de optimización estrictamente convexo para estimar el metabolismo celular de manera fenotipo-específica y termodinámicamente consistente



Proyecto
 (2023)

Modelo en base a restricciones para predecir el efecto del estado metabólico en el perfil de modificaciones epigenéticas



Proyecto
 (2021)

Constraint-based model of metabolism integrating cellular metabolic cycles and metabolic-epigenetic interactions



Proyecto
 (2017)

4D Nucleome

National Institutes of Health, USA (1)

Proyecto
2016-2017
Postdoctorado

20
Marcelo Rivas

Postdoctoral Researcheer

UNIVERSITY OF CALIFORNIA, SAN DIEGO

San Diego, Estados Unidos

1
Karlo Guerrero

Investigador posdoctoral

Escuela de Ingeniería Bioquímica

Pontificia Universidad Católica de Valparaíso

Valparaíso, Chile

1
Raul Conejeros

Profesor Titular

ESCUELA DE INGENIERIA BIOQUIMICA, PONTIFCIA UNIVERSIDAD CATOLICA DE VALPARAISO

Valparaiso, Chile